People Matter

Senior Director, Software, Platform Engineering

Apton Biosystems

Apton Biosystems

Software Engineering, Sales & Business Development
Menlo Park, CA, USA
USD 259,100-388,700 / year
Posted on Dec 2, 2025

Senior Director, Software, Platform Engineering

PacBio (NASDAQ: PACB) is a premier life science technology company that designs, develops, and manufactures advanced sequencing solutions to help scientists and clinical researchers resolve genetically complex problems. Our mission is to enable the promise of genomics to better human health. Genomics is core to all biological processes, and our advanced genomics tools provide scientists and clinical researchers the insights to better understand biology and health. We are now entering the century of biology and genomics is at the heart of the next revolution. Become part of the new paradigm in gene sequencing and help shape the future of genomic study by joining the PacBio team.

Position Summary:
As the Senior Director of Platform Engineering at PacBio, you will lead the teams responsible for designing, building, testing, and maintaining the platform software and infrastructure that power our next-generation sequencing systems. Your mission is to enable reliable, scalable, secure, and high-performance software delivery across the organization. You will oversee Platform Engineering and Software QA, ensuring that both development enablement and quality assurance functions work cohesively to deliver world-class software. You will collaborate cross-functionally with development, verification/validation,
manufacturing, and IT teams to ensure software quality, security, reproducibility, and operational excellence. Your leadership will directly impact the efficiency, reliability, and performance of PacBio’s sequencing instruments - empowering scientists and researchers worldwide.

Responsibilities:

  • Define and execute the vision and roadmap for platform engineering and software QA in alignment with company and R&D goals

  • Provide technical leadership and strategic direction across platform, infrastructure, DevOps, QA, and secure software development functions

  • Lead, mentor, and develop a high-performing team of platform and software QA engineers

  • Drive continual improvement in software delivery efficiency, reliability, and scalability

  • Own and evolve the software delivery pipeline, including build systems, packaging, deployment, and release management

  • Establish and enforce secure development and QA practices, vulnerability management, and compliance with internal security standards

  • Implement and optimize CI/CD pipelines, test automation frameworks, and branching/versioning strategies

  • Oversee the development and execution of a comprehensive software QA strategy, ensuring appropriate levels of verification, validation, regression, and performance testing across all product lines

  • Define and enforce best practices for source control, build orchestration, and environment management

  • Collaborate with development, IT, V&V, and manufacturing teams to streamline handoffs and enhance integration processes

  • Oversee OS configuration, performance tuning, and system-level optimization for sequencing instruments and supporting platforms

  • Foster a culture of collaboration, transparency, and technical rigor across the software organization

Required Qualifications:

  • Bachelor’s, Master’s, or Ph.D. in Computer Science, Computer Engineering, or related discipline

  • 10+ years of software engineering experience, including 3+ years in a senior leadership role (Senior Manager, Director, or equivalent)

  • Experience leading multi-disciplinary software organizations including platform engineering, DevOps, or software QA teams

  • Strong understanding of software architecture, quality assurance principles and development best practices

  • Track record of delivering high-quality software systems in complex, multidisciplinary environments

  • Familiarity with regulatory compliance frameworks relevant to software development and experience working with Quality & Regulatory teams

  • Hands-on experience with CI/CD pipelines, automated testing, and release engineering

  • Experience in Linux systems administration, bash scripting, OS configuration, and performance tuning

  • Familiarity with secure development practices and testing and tools for vulnerability detection and remediation

  • Proficiency in one or more programming languages (e.g.; C++, Python, C#)

  • Familiarity with containerization and orchestration tools (Docker/Podman, Singularity)

  • Strong problem-solving, analytical, and cross-functional communication skills

  • Knowledge of Agile software development and QA methodologies

  • Experience in debugging hardware and software issues in complex computer systems with a deep understanding of system-level interactions

  • Strong communication skills and ability to work closely with other teams and stakeholders

Preferred Experience:

  • Understanding of automation, infrastructure-as-code, and configuration management tools (e.g., Ansible, Puppet, Chef)

  • Experience developing software for scientific instrumentation or regulated domains (biotech, medical devices, life sciences)

  • In-depth knowledge of Linux internals and distributed systems

  • Experience leading platform modernization or cloud transformation initiatives

  • Demonstrated success in improving software delivery, platform reliability, and quality practices

  • Understanding of FDA regulated processes

Candidates must have current authorization to work in the United States without the need for present or future sponsorship.


Non-Field Based Employees are required to be onsite Monday-Thursday (Friday work from home). Depending on the role, some employees may be required to be 100% onsite.


You may be required from time to time to visit and work at PacBio locations and for such times as the Company considers necessary for the proper performance of your duties.


All listed tasks and responsibilities are deemed as essential functions to this position; however, business conditions may require reasonable accommodations for additional tasks and responsibilities.


All qualified applicants will receive consideration for employment without regard to race, sex, color, religion, national origin, protected veteran status, or on the basis of disability, gender identity, and sexual orientation.

#LI-Onsite

Salary Range:

$259,100.00 - $388,700.00



To all Staffing and Recruiting Agencies: Our Careers Site is only for individuals seeking a job at PacBio. Staffing and recruiting agencies and individuals being represented by an agency are not authorized to use this site or to submit profiles, applications or resumes, and any such submissions will be considered unsolicited. PacBio does not accept unsolicited resumes or applications from agencies. Please do not forward resumes to our jobs alias, PacBio employees or any other company location. PacBio is not responsible for any fees related to unsolicited resumes/applications.


All qualified applicants will receive consideration for employment without regard to race, sex, color, religion, national origin, protected veteran status, or on the basis of disability, gender identity, and sexual orientation.

If you are an individual with a disability and require a reasonable accommodation to complete any part of the application process, or are limited in the ability or unable to access or use this online application process and need an alternative method for applying, you may contact us at 650-521-8000, or careers@pacificbiosciences.com for assistance.

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